Emil Alexov to Software
This is a "connection" page, showing publications Emil Alexov has written about Software.
Connection Strength
5.889
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SAAMBE-SEQ: a sequence-based method for predicting mutation effect on protein-protein binding affinity. Bioinformatics. 2021 05 17; 37(7):992-999.
Score: 0.616
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DelPhi Suite: New Developments and Review of Functionalities. J Comput Chem. 2019 10 30; 40(28):2502-2508.
Score: 0.540
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Predicting protein-DNA binding free energy change upon missense mutations using modified MM/PBSA approach: SAMPDI webserver. Bioinformatics. 2018 03 01; 34(5):779-786.
Score: 0.493
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DelPhiForce web server: electrostatic forces and energy calculations and visualization. Bioinformatics. 2017 Nov 15; 33(22):3661-3663.
Score: 0.483
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DelPhiForce, a tool for electrostatic force calculations: Applications to macromolecular binding. J Comput Chem. 2017 04 05; 38(9):584-593.
Score: 0.457
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DelPhiPKa web server: predicting pKa of proteins, RNAs and DNAs. Bioinformatics. 2016 Feb 15; 32(4):614-5.
Score: 0.419
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ProBLM web server: protein and membrane placement and orientation package. Comput Math Methods Med. 2014; 2014:838259.
Score: 0.383
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Continuous development of schemes for parallel computing of the electrostatics in biological systems: implementation in DelPhi. J Comput Chem. 2013 Aug 15; 34(22):1949-60.
Score: 0.355
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BION web server: predicting non-specifically bound surface ions. Bioinformatics. 2013 Mar 15; 29(6):805-6.
Score: 0.347
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Protein Nano-Object Integrator (ProNOI) for generating atomic style objects for molecular modeling. BMC Struct Biol. 2012 Dec 05; 12:31.
Score: 0.343
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Highly efficient and exact method for parallelization of grid-based algorithms and its implementation in DelPhi. J Comput Chem. 2012 Sep 15; 33(24):1960-6.
Score: 0.331
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DelPhi web server v2: incorporating atomic-style geometrical figures into the computational protocol. Bioinformatics. 2012 Jun 15; 28(12):1655-7.
Score: 0.328
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Predicting folding free energy changes upon single point mutations. Bioinformatics. 2012 Mar 01; 28(5):664-71.
Score: 0.322
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SAAFEC-SEQ: A Sequence-Based Method for Predicting the Effect of Single Point Mutations on Protein Thermodynamic Stability. Int J Mol Sci. 2021 Jan 09; 22(2).
Score: 0.150
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SAAMBE-3D: Predicting Effect of Mutations on Protein-Protein Interactions. Int J Mol Sci. 2020 Apr 07; 21(7).
Score: 0.142
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Computational Investigation of the Missense Mutations in DHCR7 Gene Associated with Smith-Lemli-Opitz Syndrome. Int J Mol Sci. 2018 Jan 04; 19(1).
Score: 0.122
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Optimization of electrostatic interactions in protein-protein complexes. Biophys J. 2007 Nov 15; 93(10):3340-52.
Score: 0.059