Connection

Deepak Bastia to Molecular Sequence Data

This is a "connection" page, showing publications Deepak Bastia has written about Molecular Sequence Data.
Connection Strength

0.836
  1. Mechanistic insights into replication termination as revealed by investigations of the Reb1-Ter3 complex of Schizosaccharomyces pombe. Mol Cell Biol. 2008 Nov; 28(22):6844-57.
    View in: PubMed
    Score: 0.063
  2. Replication termination mechanism as revealed by Tus-mediated polar arrest of a sliding helicase. Proc Natl Acad Sci U S A. 2008 Sep 02; 105(35):12831-6.
    View in: PubMed
    Score: 0.063
  3. Molecular architecture of a eukaryotic DNA replication terminus-terminator protein complex. Mol Cell Biol. 2006 Nov; 26(21):8061-74.
    View in: PubMed
    Score: 0.055
  4. Structural and functional analysis of a bipolar replication terminus. Implications for the origin of polarity of fork arrest. J Biol Chem. 2001 Apr 20; 276(16):13160-8.
    View in: PubMed
    Score: 0.037
  5. Mechanistic studies of initiator-initiator interaction and replication initiation. EMBO J. 1998 Sep 01; 17(17):5192-200.
    View in: PubMed
    Score: 0.032
  6. Mechanistic studies on the impact of transcription on sequence-specific termination of DNA replication and vice versa. J Biol Chem. 1998 Jan 30; 273(5):3051-9.
    View in: PubMed
    Score: 0.030
  7. Termination of DNA replication in prokaryotic chromosomes. Genet Eng (N Y). 1997; 19:101-19.
    View in: PubMed
    Score: 0.028
  8. Helicase-contrahelicase interaction and the mechanism of termination of DNA replication. Cell. 1996 Nov 29; 87(5):881-91.
    View in: PubMed
    Score: 0.028
  9. Direct physical interaction between DnaG primase and DnaB helicase of Escherichia coli is necessary for optimal synthesis of primer RNA. Proc Natl Acad Sci U S A. 1996 Nov 12; 93(23):12902-7.
    View in: PubMed
    Score: 0.028
  10. The structure and function of the replication terminator protein of Bacillus subtilis: identification of the 'winged helix' DNA-binding domain. EMBO J. 1996 Jun 17; 15(12):3164-73.
    View in: PubMed
    Score: 0.027
  11. The replication initiator protein pi of the plasmid R6K specifically interacts with the host-encoded helicase DnaB. Proc Natl Acad Sci U S A. 1996 May 28; 93(11):5522-6.
    View in: PubMed
    Score: 0.027
  12. The relationship between sequence-specific termination of DNA replication and transcription. EMBO J. 1996 May 15; 15(10):2530-9.
    View in: PubMed
    Score: 0.027
  13. The dimer-dimer interaction surface of the replication terminator protein of Bacillus subtilis and termination of DNA replication. Proc Natl Acad Sci U S A. 1996 Apr 16; 93(8):3253-8.
    View in: PubMed
    Score: 0.027
  14. The contrahelicase activities of the replication terminator proteins of Escherichia coli and Bacillus subtilis are helicase-specific and impede both helicase translocation and authentic DNA unwinding. J Biol Chem. 1995 Dec 08; 270(49):29138-44.
    View in: PubMed
    Score: 0.026
  15. Crystallization and preliminary X-ray characterization of the eukaryotic replication terminator Reb1-Ter DNA complex. Acta Crystallogr F Struct Biol Commun. 2015 Apr; 71(Pt 4):414-8.
    View in: PubMed
    Score: 0.025
  16. Termination of DNA replication in vitro: requirement for stereospecific interaction between two dimers of the replication terminator protein of Bacillus subtilis and with the terminator site to elicit polar contrahelicase and fork impedance. EMBO J. 1995 Feb 01; 14(3):619-28.
    View in: PubMed
    Score: 0.025
  17. Multiple pathways of copy control of gamma replicon of R6K: mechanisms both dependent on and independent of cooperativity of interaction of tau protein with DNA affect the copy number. Proc Natl Acad Sci U S A. 1994 Jul 05; 91(14):6438-42.
    View in: PubMed
    Score: 0.024
  18. Structural and functional analysis of a replication enhancer: separation of the enhancer activity from origin function by mutational dissection of the replication origin gamma of plasmid R6K. Proc Natl Acad Sci U S A. 1992 Jun 01; 89(11):5078-82.
    View in: PubMed
    Score: 0.020
  19. Activation in vivo of the minimal replication origin beta of plasmid R6K requires a small target sequence essential for DNA looping. New Biol. 1992 May; 4(5):569-80.
    View in: PubMed
    Score: 0.020
  20. Activation of distant replication origins in vivo by DNA looping as revealed by a novel mutant form of an initiator protein defective in cooperativity at a distance. EMBO J. 1992 Mar; 11(3):1205-16.
    View in: PubMed
    Score: 0.020
  21. Conformational changes induced by integration host factor at origin gamma of R6K and copy number control. J Biol Chem. 1991 Aug 25; 266(24):15924-37.
    View in: PubMed
    Score: 0.019
  22. Cooperativity at a distance promoted by the combined action of two replication initiator proteins and a DNA bending protein at the replication origin of pSC101. Genes Dev. 1991 Aug; 5(8):1453-63.
    View in: PubMed
    Score: 0.019
  23. Replication terminator protein of Escherichia coli is a transcriptional repressor of its own synthesis. Proc Natl Acad Sci U S A. 1991 May 01; 88(9):3867-71.
    View in: PubMed
    Score: 0.019
  24. Escherichia coli replication terminator protein impedes simian virus 40 (SV40) DNA replication fork movement and SV40 large tumor antigen helicase activity in vitro at a prokaryotic terminus sequence. Proc Natl Acad Sci U S A. 1991 Apr 01; 88(7):2618-22.
    View in: PubMed
    Score: 0.019
  25. DNA-protein interaction at the replication termini of plasmid R6K. Genes Dev. 1991 Jan; 5(1):74-82.
    View in: PubMed
    Score: 0.019
  26. The DNA-binding domain of HPV-16 E2 protein interaction with the viral enhancer: protein-induced DNA bending and role of the nonconserved core sequence in binding site affinity. Virology. 1990 Feb; 174(2):557-75.
    View in: PubMed
    Score: 0.017
  27. The replication terminator protein of E. coli is a DNA sequence-specific contra-helicase. Cell. 1989 Nov 17; 59(4):667-74.
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    Score: 0.017
  28. A host-encoded DNA-binding protein promotes termination of plasmid replication at a sequence-specific replication terminus. Proc Natl Acad Sci U S A. 1989 May; 86(9):3026-30.
    View in: PubMed
    Score: 0.017
  29. Interaction of the bovine papillomavirus type 1 E2 transcriptional control protein with the viral enhancer: purification of the DNA-binding domain and analysis of its contact points with DNA. J Virol. 1988 Jun; 62(6):1925-31.
    View in: PubMed
    Score: 0.016
  30. DNA bending is induced in an enhancer by the DNA-binding domain of the bovine papillomavirus E2 protein. Proc Natl Acad Sci U S A. 1988 Mar; 85(6):1826-30.
    View in: PubMed
    Score: 0.015
  31. Crystal structure of pi initiator protein-iteron complex of plasmid R6K: implications for initiation of plasmid DNA replication. Proc Natl Acad Sci U S A. 2006 Dec 05; 103(49):18481-6.
    View in: PubMed
    Score: 0.014
  32. Crystal structure of the replication terminator protein from B. subtilis at 2.6 A. Cell. 1995 Feb 24; 80(4):651-60.
    View in: PubMed
    Score: 0.006
  33. Crystallization and preliminary structural analysis of the replication terminator protein of Bacillus subtilis. J Biol Chem. 1992 Sep 15; 267(26):18885-9.
    View in: PubMed
    Score: 0.005
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.