Connection

Deepak Bastia to Escherichia coli

This is a "connection" page, showing publications Deepak Bastia has written about Escherichia coli.
Connection Strength

3.463
  1. Investigations of pi initiator protein-mediated interaction between replication origins alpha and gamma of the plasmid R6K. J Biol Chem. 2010 Feb 19; 285(8):5695-704.
    View in: PubMed
    Score: 0.287
  2. Replication initiation at a distance: determination of the cis- and trans-acting elements of replication origin alpha of plasmid R6K. J Biol Chem. 2010 Feb 19; 285(8):5705-12.
    View in: PubMed
    Score: 0.287
  3. Mechanisms of polar arrest of a replication fork. Mol Microbiol. 2009 Apr; 72(2):279-85.
    View in: PubMed
    Score: 0.272
  4. Replication termination mechanism as revealed by Tus-mediated polar arrest of a sliding helicase. Proc Natl Acad Sci U S A. 2008 Sep 02; 105(35):12831-6.
    View in: PubMed
    Score: 0.261
  5. Mechanistic studies of initiator-initiator interaction and replication initiation. EMBO J. 1998 Sep 01; 17(17):5192-200.
    View in: PubMed
    Score: 0.131
  6. Mechanistic studies on the impact of transcription on sequence-specific termination of DNA replication and vice versa. J Biol Chem. 1998 Jan 30; 273(5):3051-9.
    View in: PubMed
    Score: 0.126
  7. Direct physical interaction between DnaG primase and DnaB helicase of Escherichia coli is necessary for optimal synthesis of primer RNA. Proc Natl Acad Sci U S A. 1996 Nov 12; 93(23):12902-7.
    View in: PubMed
    Score: 0.116
  8. The replication initiator protein pi of the plasmid R6K specifically interacts with the host-encoded helicase DnaB. Proc Natl Acad Sci U S A. 1996 May 28; 93(11):5522-6.
    View in: PubMed
    Score: 0.112
  9. The contrahelicase activities of the replication terminator proteins of Escherichia coli and Bacillus subtilis are helicase-specific and impede both helicase translocation and authentic DNA unwinding. J Biol Chem. 1995 Dec 08; 270(49):29138-44.
    View in: PubMed
    Score: 0.108
  10. The replication terminator protein of the gram-positive bacterium Bacillus subtilis functions as a polar contrahelicase in gram-negative Escherichia coli. Proc Natl Acad Sci U S A. 1994 Nov 08; 91(23):11143-7.
    View in: PubMed
    Score: 0.101
  11. Multiple pathways of copy control of gamma replicon of R6K: mechanisms both dependent on and independent of cooperativity of interaction of tau protein with DNA affect the copy number. Proc Natl Acad Sci U S A. 1994 Jul 05; 91(14):6438-42.
    View in: PubMed
    Score: 0.098
  12. A 27 kd protein of E. coli promotes antitermination of replication in vitro at a sequence-specific replication terminus. Cell. 1993 Jan 15; 72(1):113-20.
    View in: PubMed
    Score: 0.089
  13. Structural and functional analysis of a replication enhancer: separation of the enhancer activity from origin function by mutational dissection of the replication origin gamma of plasmid R6K. Proc Natl Acad Sci U S A. 1992 Jun 01; 89(11):5078-82.
    View in: PubMed
    Score: 0.085
  14. Cooperativity at a distance promoted by the combined action of two replication initiator proteins and a DNA bending protein at the replication origin of pSC101. Genes Dev. 1991 Aug; 5(8):1453-63.
    View in: PubMed
    Score: 0.080
  15. Replication terminator protein of Escherichia coli is a transcriptional repressor of its own synthesis. Proc Natl Acad Sci U S A. 1991 May 01; 88(9):3867-71.
    View in: PubMed
    Score: 0.079
  16. Escherichia coli replication terminator protein impedes simian virus 40 (SV40) DNA replication fork movement and SV40 large tumor antigen helicase activity in vitro at a prokaryotic terminus sequence. Proc Natl Acad Sci U S A. 1991 Apr 01; 88(7):2618-22.
    View in: PubMed
    Score: 0.078
  17. Sequence-specific and polarized replication termination in vitro: complementation of extracts of tus- Escherichia coli by purified Ter protein and analysis of termination intermediates. Proc Natl Acad Sci U S A. 1990 Apr; 87(7):2828-32.
    View in: PubMed
    Score: 0.073
  18. The replication terminator protein of E. coli is a DNA sequence-specific contra-helicase. Cell. 1989 Nov 17; 59(4):667-74.
    View in: PubMed
    Score: 0.071
  19. A host-encoded DNA-binding protein promotes termination of plasmid replication at a sequence-specific replication terminus. Proc Natl Acad Sci U S A. 1989 May; 86(9):3026-30.
    View in: PubMed
    Score: 0.069
  20. A replication initiator protein enhances the rate of hybrid formation between a silencer RNA and an activator RNA. Cell. 1987 Nov 06; 51(3):455-62.
    View in: PubMed
    Score: 0.062
  21. DnaA protein is required for replication of the minimal replicon of the broad-host-range plasmid RK2 in Escherichia coli. J Bacteriol. 1987 Oct; 169(10):4703-9.
    View in: PubMed
    Score: 0.062
  22. The integration host factor of Escherichia coli binds to bent DNA at the origin of replication of the plasmid pSC101. Cell. 1987 Jun 05; 49(5):709-17.
    View in: PubMed
    Score: 0.060
  23. The replication initiator protein of plasmid pSC101 is a transcriptional repressor of its own cistron. Proc Natl Acad Sci U S A. 1985 Apr; 82(8):2252-6.
    View in: PubMed
    Score: 0.052
  24. DNA-protein interaction at the replication origins of plasmid chromosomes. Basic Life Sci. 1985; 30:397-414.
    View in: PubMed
    Score: 0.051
  25. The DnaK-DnaJ-GrpE chaperone system activates inert wild type pi initiator protein of R6K into a form active in replication initiation. J Biol Chem. 2004 Dec 03; 279(49):50886-94.
    View in: PubMed
    Score: 0.050
  26. Reconstitution of F factor DNA replication in vitro with purified proteins. J Biol Chem. 2004 Apr 23; 279(17):17404-10.
    View in: PubMed
    Score: 0.048
  27. Biochemical investigations of control of replication initiation of plasmid R6K. J Biol Chem. 2004 Feb 20; 279(8):6711-9.
    View in: PubMed
    Score: 0.047
  28. DNA-protein interaction at the origin of DNA replication of the plasmid pSC101. Cell. 1983 Dec; 35(2 Pt 1):495-502.
    View in: PubMed
    Score: 0.047
  29. Use of gene fusions and protein-protein interaction in the isolation of a biologically active regulatory protein: the replication initiator protein of plasmid R6K. Proc Natl Acad Sci U S A. 1983 Nov; 80(22):6848-52.
    View in: PubMed
    Score: 0.047
  30. Reconstitution of R6K DNA replication in vitro using 22 purified proteins. J Biol Chem. 2003 Nov 14; 278(46):45476-84.
    View in: PubMed
    Score: 0.046
  31. Structural and functional analysis of a bipolar replication terminus. Implications for the origin of polarity of fork arrest. J Biol Chem. 2001 Apr 20; 276(16):13160-8.
    View in: PubMed
    Score: 0.039
  32. Nucleotide sequence determination of a strong promoter of the colicin E 1 plasmid. Analysis of restriction sites protected by RNA polymerase interactions before and after limited transcription. Nucleic Acids Res. 1979 Nov 10; 7(5):1247-62.
    View in: PubMed
    Score: 0.036
  33. Termination of DNA replication of bacterial and plasmid chromosomes. Mol Microbiol. 1999 Mar; 31(6):1611-8.
    View in: PubMed
    Score: 0.034
  34. The nucleotide sequence surrounding the origin of DNA replication of Col E1. Nucleic Acids Res. 1977 Sep; 4(9):3123-42.
    View in: PubMed
    Score: 0.031
  35. Helicase-contrahelicase interaction and the mechanism of termination of DNA replication. Cell. 1996 Nov 29; 87(5):881-91.
    View in: PubMed
    Score: 0.029
  36. The relationship between sequence-specific termination of DNA replication and transcription. EMBO J. 1996 May 15; 15(10):2530-9.
    View in: PubMed
    Score: 0.028
  37. The dimer-dimer interaction surface of the replication terminator protein of Bacillus subtilis and termination of DNA replication. Proc Natl Acad Sci U S A. 1996 Apr 16; 93(8):3253-8.
    View in: PubMed
    Score: 0.028
  38. Termination of DNA replication in vitro: requirement for stereospecific interaction between two dimers of the replication terminator protein of Bacillus subtilis and with the terminator site to elicit polar contrahelicase and fork impedance. EMBO J. 1995 Feb 01; 14(3):619-28.
    View in: PubMed
    Score: 0.026
  39. Activation in vivo of the minimal replication origin beta of plasmid R6K requires a small target sequence essential for DNA looping. New Biol. 1992 May; 4(5):569-80.
    View in: PubMed
    Score: 0.021
  40. Activation of distant replication origins in vivo by DNA looping as revealed by a novel mutant form of an initiator protein defective in cooperativity at a distance. EMBO J. 1992 Mar; 11(3):1205-16.
    View in: PubMed
    Score: 0.021
  41. Replication of plasmid R6K origin gamma in vitro. Dependence on dual initiator proteins and inhibition by transcription. J Biol Chem. 1991 Aug 25; 266(24):16056-62.
    View in: PubMed
    Score: 0.020
  42. The E2 "gene" of bovine papillomavirus encodes an enhancer-binding protein. Proc Natl Acad Sci U S A. 1987 Mar; 84(5):1215-8.
    View in: PubMed
    Score: 0.015
  43. The nucleotide sequence of the replication origin beta of the plasmid R6K. J Biol Chem. 1982 Nov 25; 257(22):13823-7.
    View in: PubMed
    Score: 0.011
  44. Primary structure of the replication initiation protein of plasmid R6K. Proc Natl Acad Sci U S A. 1982 Sep; 79(18):5475-9.
    View in: PubMed
    Score: 0.011
  45. Termination of DNA replication in vitro at a sequence-specific replication terminus. Cell. 1981 Mar; 23(3):681-7.
    View in: PubMed
    Score: 0.010
  46. Crystallization and preliminary structural analysis of the replication terminator protein of Bacillus subtilis. J Biol Chem. 1992 Sep 15; 267(26):18885-9.
    View in: PubMed
    Score: 0.005
  47. Heterogeneity, complexity, and repetition of the chloroplast DNA of Chlamydomonas reinhardtii. Proc Natl Acad Sci U S A. 1971 Jun; 68(6):1157-61.
    View in: PubMed
    Score: 0.005
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.