Dev Arya to Neomycin
This is a "connection" page, showing publications Dev Arya has written about Neomycin.
Connection Strength
9.339
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A fluorescent aminosugar to rapidly screen and study RNA binders. Methods Enzymol. 2019; 623:291-314.
Score: 0.627
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Aminoglycoside Functionalization as a Tool for Targeting Nucleic Acids. Methods Mol Biol. 2019; 1973:147-162.
Score: 0.608
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Probing A-form DNA: A fluorescent aminosugar probe and dual recognition by anthraquinone-neomycin conjugates. Bioorg Med Chem. 2017 02 15; 25(4):1309-1319.
Score: 0.524
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Influence of linker length in shape recognition of B* DNA by dimeric aminoglycosides. Bioorg Med Chem. 2015 Jul 01; 23(13):3105-9.
Score: 0.472
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Recognition of HIV-TAR RNA using neomycin-benzimidazole conjugates. Bioorg Med Chem Lett. 2013 Oct 15; 23(20):5689-93.
Score: 0.419
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Dual recognition of the human telomeric G-quadruplex by a neomycin-anthraquinone conjugate. Chem Commun (Camb). 2013 Jun 28; 49(51):5796-8.
Score: 0.415
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Thermodynamics of nucleic acid "shape readout" by an aminosugar. Biochemistry. 2011 Oct 25; 50(42):9088-113.
Score: 0.368
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Recognition of HIV TAR RNA by triazole linked neomycin dimers. Bioorg Med Chem Lett. 2011 Aug 15; 21(16):4788-92.
Score: 0.361
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Neomycin-neomycin dimer: an all-carbohydrate scaffold with high affinity for AT-rich DNA duplexes. J Am Chem Soc. 2011 May 18; 133(19):7361-75.
Score: 0.357
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Synthesis and spectroscopic studies of the aminoglycoside (neomycin)--perylene conjugate binding to human telomeric DNA. Biochemistry. 2011 Apr 12; 50(14):2838-49.
Score: 0.354
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Probing the recognition surface of a DNA triplex: binding studies with intercalator-neomycin conjugates. Biochemistry. 2010 Jul 06; 49(26):5540-52.
Score: 0.338
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Triple recognition of B-DNA by a neomycin-Hoechst 33258-pyrene conjugate. Biochemistry. 2010 Jan 26; 49(3):452-69.
Score: 0.327
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Triple recognition of B-DNA. Bioorg Med Chem Lett. 2009 Sep 01; 19(17):4974-9.
Score: 0.316
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Molecular recognition of single-stranded RNA: neomycin binding to poly(A). FEBS Lett. 2009 Jul 07; 583(13):2269-75.
Score: 0.313
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Molecular recognition of a DNA:RNA hybrid: sub-nanomolar binding by a neomycin-methidium conjugate. Bioorg Med Chem Lett. 2008 Jul 15; 18(14):4142-5.
Score: 0.292
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Sequence-specific targeting of RNA with an oligonucleotide-neomycin conjugate. Bioconjug Chem. 2007 Jan-Feb; 18(1):160-9.
Score: 0.265
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Recognition of B-DNA by neomycin--Hoechst 33258 conjugates. Biochemistry. 2006 Aug 29; 45(34):10217-32.
Score: 0.259
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Neomycin improves cationic lipid-mediated transfection of DNA in human cells. Bioorg Med Chem Lett. 2005 Jul 15; 15(14):3467-9.
Score: 0.239
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From triplex to B-form duplex stabilization: reversal of target selectivity by aminoglycoside dimers. Bioorg Med Chem Lett. 2004 Sep 20; 14(18):4643-6.
Score: 0.226
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Reaching into the major groove of B-DNA: synthesis and nucleic acid binding of a neomycin-hoechst 33258 conjugate. J Am Chem Soc. 2003 Oct 15; 125(41):12398-9.
Score: 0.212
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Aminoglycoside (neomycin) preference is for A-form nucleic acids, not just RNA: results from a competition dialysis study. J Am Chem Soc. 2003 Aug 27; 125(34):10148-9.
Score: 0.210
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Combining the best in triplex recognition: synthesis and nucleic acid binding of a BQQ-neomycin conjugate. J Am Chem Soc. 2003 Jul 09; 125(27):8070-1.
Score: 0.208
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Neomycin binding to Watson-Hoogsteen (W-H) DNA triplex groove: a model. J Am Chem Soc. 2003 Apr 02; 125(13):3733-44.
Score: 0.204
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Pyrene-neomycin conjugate: dual recognition of a DNA triple helix. Chem Commun (Camb). 2002 Jan 07; (1):70-1.
Score: 0.187
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Antimicrobial Activity, AME Resistance, and A-Site Binding Studies of Anthraquinone-Neomycin Conjugates. ACS Infect Dis. 2017 03 10; 3(3):206-215.
Score: 0.134
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Multivalency in the recognition and antagonism of a HIV TAR RNA-TAT assembly using an aminoglycoside benzimidazole scaffold. Org Biomol Chem. 2016 Feb 14; 14(6):2052-6.
Score: 0.125
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A pH Sensitive High-Throughput Assay for miRNA Binding of a Peptide-Aminoglycoside (PA) Library. PLoS One. 2015; 10(12):e0144251.
Score: 0.123
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Influence of linker length and composition on enzymatic activity and ribosomal binding of neomycin dimers. Antimicrob Agents Chemother. 2015 Jul; 59(7):3899-905.
Score: 0.118
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Shape readout of AT-rich DNA by carbohydrates. Biopolymers. 2014 Jul; 101(7):720-32.
Score: 0.111
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Targeting C-myc G-quadruplex: dual recognition by aminosugar-bisbenzimidazoles with varying linker lengths. Molecules. 2013 Nov 18; 18(11):14228-40.
Score: 0.107
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An assay for human telomeric G-quadruplex DNA binding drugs. Bioorg Med Chem Lett. 2013 Dec 15; 23(24):6695-9.
Score: 0.106
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Characterization of ribosomal binding and antibacterial activities using two orthogonal high-throughput screens. Antimicrob Agents Chemother. 2013 Oct; 57(10):4717-26.
Score: 0.104
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Click dimers to target HIV TAR RNA conformation. Biochemistry. 2012 Mar 20; 51(11):2331-47.
Score: 0.095
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New approaches toward recognition of nucleic acid triple helices. Acc Chem Res. 2011 Feb 15; 44(2):134-46.
Score: 0.087
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Aminoglycoside binding to Oxytricha nova telomeric DNA. Biochemistry. 2010 Nov 16; 49(45):9891-903.
Score: 0.086
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DNA triple helix stabilization by aminoglycoside antibiotics. Bioorg Med Chem Lett. 2000 Sep 04; 10(17):1897-9.
Score: 0.043