Connection

Dev Arya to DNA

This is a "connection" page, showing publications Dev Arya has written about DNA.
Connection Strength

5.989
DNA
  1. Linker dependent intercalation of bisbenzimidazole-aminosugars in an RNA duplex; selectivity in RNA vs. DNA binding. Bioorg Med Chem Lett. 2016 12 15; 26(24):5989-5994.
    View in: PubMed
    Score: 0.453
  2. Shape readout of AT-rich DNA by carbohydrates. Biopolymers. 2014 Jul; 101(7):720-32.
    View in: PubMed
    Score: 0.385
  3. Efficient stabilization of phosphodiester (PO), phosphorothioate (PS), and 2'-O-methoxy (2'-OMe) DNA?RNA hybrid duplexes by amino sugars. Biochemistry. 2012 Jul 10; 51(27):5496-505.
    View in: PubMed
    Score: 0.335
  4. Natural product DNA major groove binders. Nat Prod Rep. 2012 Feb; 29(2):134-43.
    View in: PubMed
    Score: 0.323
  5. Neomycin-neomycin dimer: an all-carbohydrate scaffold with high affinity for AT-rich DNA duplexes. J Am Chem Soc. 2011 May 18; 133(19):7361-75.
    View in: PubMed
    Score: 0.309
  6. Synthesis and spectroscopic studies of the aminoglycoside (neomycin)--perylene conjugate binding to human telomeric DNA. Biochemistry. 2011 Apr 12; 50(14):2838-49.
    View in: PubMed
    Score: 0.307
  7. New approaches toward recognition of nucleic acid triple helices. Acc Chem Res. 2011 Feb 15; 44(2):134-46.
    View in: PubMed
    Score: 0.299
  8. Probing the recognition surface of a DNA triplex: binding studies with intercalator-neomycin conjugates. Biochemistry. 2010 Jul 06; 49(26):5540-52.
    View in: PubMed
    Score: 0.292
  9. Calorimetric and spectroscopic studies of aminoglycoside binding to AT-rich DNA triple helices. Biochimie. 2010 May; 92(5):514-29.
    View in: PubMed
    Score: 0.285
  10. Triple recognition of B-DNA by a neomycin-Hoechst 33258-pyrene conjugate. Biochemistry. 2010 Jan 26; 49(3):452-69.
    View in: PubMed
    Score: 0.283
  11. Triple recognition of B-DNA. Bioorg Med Chem Lett. 2009 Sep 01; 19(17):4974-9.
    View in: PubMed
    Score: 0.273
  12. Molecular recognition of a DNA:RNA hybrid: sub-nanomolar binding by a neomycin-methidium conjugate. Bioorg Med Chem Lett. 2008 Jul 15; 18(14):4142-5.
    View in: PubMed
    Score: 0.253
  13. Recognition of the unique structure of DNA:RNA hybrids. Biochimie. 2008 Jul; 90(7):1026-39.
    View in: PubMed
    Score: 0.251
  14. Recognition of B-DNA by neomycin--Hoechst 33258 conjugates. Biochemistry. 2006 Aug 29; 45(34):10217-32.
    View in: PubMed
    Score: 0.224
  15. Neomycin improves cationic lipid-mediated transfection of DNA in human cells. Bioorg Med Chem Lett. 2005 Jul 15; 15(14):3467-9.
    View in: PubMed
    Score: 0.207
  16. From triplex to B-form duplex stabilization: reversal of target selectivity by aminoglycoside dimers. Bioorg Med Chem Lett. 2004 Sep 20; 14(18):4643-6.
    View in: PubMed
    Score: 0.196
  17. Reaching into the major groove of B-DNA: synthesis and nucleic acid binding of a neomycin-hoechst 33258 conjugate. J Am Chem Soc. 2003 Oct 15; 125(41):12398-9.
    View in: PubMed
    Score: 0.183
  18. Combining the best in triplex recognition: synthesis and nucleic acid binding of a BQQ-neomycin conjugate. J Am Chem Soc. 2003 Jul 09; 125(27):8070-1.
    View in: PubMed
    Score: 0.180
  19. Neomycin binding to Watson-Hoogsteen (W-H) DNA triplex groove: a model. J Am Chem Soc. 2003 Apr 02; 125(13):3733-44.
    View in: PubMed
    Score: 0.177
  20. Pyrene-neomycin conjugate: dual recognition of a DNA triple helix. Chem Commun (Camb). 2002 Jan 07; (1):70-1.
    View in: PubMed
    Score: 0.162
  21. DNA triple helix stabilization by aminoglycoside antibiotics. Bioorg Med Chem Lett. 2000 Sep 04; 10(17):1897-9.
    View in: PubMed
    Score: 0.148
  22. Triple-helix formation of DNA oligomers with methylthiourea-linked nucleosides (DNmt): a kinetic and thermodynamic analysis. Proc Natl Acad Sci U S A. 1999 Apr 13; 96(8):4384-9.
    View in: PubMed
    Score: 0.134
  23. Selective Inhibition of Escherichia coli RNA and DNA Topoisomerase I by Hoechst 33258 Derived Mono- and Bisbenzimidazoles. J Med Chem. 2017 06 22; 60(12):4904-4922.
    View in: PubMed
    Score: 0.118
  24. Analysis of diazofluorene DNA binding and damaging activity: DNA cleavage by a synthetic monomeric diazofluorene. Angew Chem Int Ed Engl. 2014 Aug 25; 53(35):9325-8.
    View in: PubMed
    Score: 0.096
  25. Thermodynamics of nucleic acid "shape readout" by an aminosugar. Biochemistry. 2011 Oct 25; 50(42):9088-113.
    View in: PubMed
    Score: 0.080
  26. Solid-phase synthesis of oligomeric deoxynucleic-thiourea (DNT) and deoxynucleic S-methylthiourea (DNmt): a neutral/polycationic analogue of DNA. Bioorg Med Chem Lett. 2000 Apr 17; 10(8):691-3.
    View in: PubMed
    Score: 0.036
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.