Emil Alexov to Databases, Protein
This is a "connection" page, showing publications Emil Alexov has written about Databases, Protein.
Connection Strength
2.614
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PKAD: a database of experimentally measured pKa values of ionizable groups in proteins. Database (Oxford). 2019 01 01; 2019.
Score: 0.635
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ProBLM web server: protein and membrane placement and orientation package. Comput Math Methods Med. 2014; 2014:838259.
Score: 0.466
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BANMOKI: a searchable database of homology-based 3D models and their electrostatic properties of five bacterial nucleoside monophosphate kinase families. Int J Biol Macromol. 2007 Jun 01; 41(1):114-9.
Score: 0.278
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PROTCOM: searchable database of protein complexes enhanced with domain-domain structures. Nucleic Acids Res. 2007 Jan; 35(Database issue):D575-9.
Score: 0.273
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DelPhiPKa: Including salt in the calculations and enabling polar residues to titrate. Proteins. 2018 12; 86(12):1277-1283.
Score: 0.157
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Computational investigation of proton transfer, pKa shifts and pH-optimum of protein-DNA and protein-RNA complexes. Proteins. 2017 Feb; 85(2):282-295.
Score: 0.138
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SAAFEC: Predicting the Effect of Single Point Mutations on Protein Folding Free Energy Using a Knowledge-Modified MM/PBSA Approach. Int J Mol Sci. 2016 Apr 07; 17(4):512.
Score: 0.131
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Statistical investigation of surface bound ions and further development of BION server to include pH and salt dependence. J Comput Chem. 2015 Dec 15; 36(32):2381-93.
Score: 0.127
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pKa predictions for proteins, RNAs, and DNAs with the Gaussian dielectric function using DelPhi pKa. Proteins. 2015 Dec; 83(12):2186-97.
Score: 0.127
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Protein structure analysis online. Curr Protoc Protein Sci. 2007 Nov; Chapter 2:Unit 2.13.
Score: 0.073
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Optimization of electrostatic interactions in protein-protein complexes. Biophys J. 2007 Nov 15; 93(10):3340-52.
Score: 0.072
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Predicting residue contacts using pragmatic correlated mutations method: reducing the false positives. BMC Bioinformatics. 2006 Nov 16; 7:503.
Score: 0.069
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Predicting 3D structures of transient protein-protein complexes by homology. Biochim Biophys Acta. 2006 Sep; 1764(9):1498-511.
Score: 0.067