Stephane Meystre

TitleEndowed Chair, SmartState Chair of the Translational Biomedical Informatics Center for Economic Exce
InstitutionMedical University of South Carolina
DepartmentPsychiatry and Behavioral Sciences
AddressP.O. Box MSC 200
405H
Cannon Place - 135 Cannon St.
Phone843-792-0015
ORCID ORCID Icon0000-0002-7632-9625 Additional info
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    Dr. Meystre is a SmartState Endowed Chair and Founding Director of the Translational Biomedical Informatics Center at MUSC. Dr. Meystre has a medical training and background, with graduate education and experience in biomedical informatics and Natural Language Processing (NLP). He has developed and evaluated NLP systems for clinical practice and for research, and led several projects applying NLP to clinical text for automatic text de-identification, or clinical information extraction. He is the Founder and CEO of Clinacuity, Inc.

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Pfaff ER, Girvin AT, Gabriel DL, Kostka K, Morris M, Palchuk MB, Lehmann HP, Amor B, Bissell M, Bradwell KR, Gold S, Hong SS, Loomba J, Manna A, McMurry JA, Niehaus E, Qureshi N, Walden A, Zhang XT, Zhu RL, Moffitt RA, Haendel MA, Chute CG, Adams WG, Al-Shukri S, Anzalone A, Baghal A, Bennett TD, Bernstam EV, Bernstam EV, Bissell MM, Bush B, Campion TR, Castro V, Chang J, Chaudhari DD, Chen W, Chu S, Cimino JJ, Crandall KA, Crooks M, Davies SJD, DiPalazzo J, Dorr D, Eckrich D, Eltinge SE, Fort DG, Golovko G, Gupta S, Haendel MA, Hajagos JG, Hanauer DA, Harnett BM, Horswell R, Huang N, Johnson SG, Kahn M, Khanipov K, Kieler C, Luzuriaga KR, Maidlow S, Martinez A, Mathew J, McClay JC, McMahan G, Melancon B, Meystre S, Miele L, Morizono H, Pablo R, Patel L, Phuong J, Popham DJ, Pulgarin C, Santos C, Sarkar IN, Sazo N, Setoguchi S, Soby S, Surampalli S, Suver C, Vangala UMR, Visweswaran S, Oehsen JV, Walters KM, Wiley L, Williams DA, Zai A, Pfaff ER, Girvin AT, Gabriel DL, Kostka K, Morris M, Palchuk MB, Lehmann HP, Amor B, Bissell M, Bradwell KR, Gold S, Hong SS, Loomba J, Manna A, McMurry JA, Niehaus E, Qureshi N, Walden A, Zhang XT, Zhu RL, Moffitt RA, Haendel MA, Chute CG, N3C Consortium, Adams WG, Al-Shukri S, Anzalone A, Baghal A, Bennett TD, Bernstam EV, Bernstam EV, Bissell MM, Bush B, Campion TR, Castro V, Chang J, Chaudhari DD, Chen W, Chu S, Cimino JJ, Crandall KA, Crooks M, Davies SJD, DiPalazzo J, Dorr D, Eckrich D, Eltinge SE, Fort DG, Golovko G, Gupta S, Haendel MA, Hajagos JG, Hanauer DA, Harnett BM, Horswell R, Huang N, Johnson SG, Kahn M, Khanipov K, Kieler C, Luzuriaga KR, Maidlow S, Martinez A, Mathew J, McClay JC, McMahan G, Melancon B, Meystre S, Miele L, Morizono H, Pablo R, Patel L, Phuong J, Popham DJ, Pulgarin C, Santos C, Sarkar IN, Sazo N, Setoguchi S, Soby S, Surampalli S, Suver C, Vangala UMR, Visweswaran S, Oehsen JV, Walters KM, Wiley L, Williams DA, Zai A. Synergies between centralized and federated approaches to data quality: a report from the national COVID cohort collaborative. J Am Med Inform Assoc. 2022 03 15; 29(4):609-618. PMID: 34590684; PMCID: PMC8500110.
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    2. Ford D, Harvey JB, McElligott J, King K, Simpson KN, Valenta S, Warr EH, Walsh T, Debenham E, Teasdale C, Meystre S, Obeid JS, Metts C, Lenert LA, Ford D, Harvey JB, McElligott J, King K, Simpson KN, Valenta S, Warr EH, Walsh T, Debenham E, Teasdale C, Meystre S, Obeid JS, Metts C, Lenert LA. Leveraging health system telehealth and informatics infrastructure to create a continuum of services for COVID-19 screening, testing, and treatment. J Am Med Inform Assoc. 2020 12 09; 27(12):1871-1877. PMID: 32602884; PMCID: PMC7337763.
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    3. Obeid JS, Davis M, Turner M, Meystre SM, Heider PM, O'Bryan EC, Lenert LA, Obeid JS, Davis M, Turner M, Meystre SM, Heider PM, O'Bryan EC, Lenert LA. An artificial intelligence approach to COVID-19 infection risk assessment in virtual visits: A case report. J Am Med Inform Assoc. 2020 08 01; 27(8):1321-1325. PMID: 32449766; PMCID: PMC7313981.
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    4. Obeid JS, Heider PM, Weeda ER, Matuskowitz AJ, Carr CM, Gagnon K, Crawford T, Meystre SM, Obeid JS, Heider PM, Weeda ER, Matuskowitz AJ, Carr CM, Gagnon K, Crawford T, Meystre SM. Impact of De-Identification on Clinical Text Classification Using Traditional and Deep Learning Classifiers. Stud Health Technol Inform. 2019 Aug 21; 264:283-287. PMID: 31437930; PMCID: PMC6779034.
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    5. Meystre SM, Heider PM, Kim Y, Aruch DB, Britten CD, Meystre SM, Heider PM, Kim Y, Aruch DB, Britten CD. Automatic trial eligibility surveillance based on unstructured clinical data. Int J Med Inform. 2019 09; 129:13-19. PMID: 31445247; PMCID: PMC6717538.
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    6. AAlAbdulsalam AK, Garvin JH, Redd A, Carter ME, Sweeny C, Meystre SM, AAlAbdulsalam AK, Garvin JH, Redd A, Carter ME, Sweeny C, Meystre SM. Automated Extraction and Classification of Cancer Stage Mentions fromUnstructured Text Fields in a Central Cancer Registry. AMIA Jt Summits Transl Sci Proc. 2018; 2017:16-25. PMID: 29888032; PMCID: PMC5961766.
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    7. Zhu VJ, Walker TD, Warren RW, Jenny PB, Meystre S, Lenert LA, Zhu VJ, Walker TD, Warren RW, Jenny PB, Meystre S, Lenert LA. Identifying Falls Risk Screenings Not Documented with Administrative Codes Using Natural Language Processing. AMIA Annu Symp Proc. 2017; 2017:1923-1930. PMID: 29854264; PMCID: PMC5977708.
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    8. Garvin JH, Kim Y, Gobbel GT, Matheny ME, Redd A, Bray BE, Heidenreich P, Bolton D, Heavirland J, Kelly N, Reeves R, Kalsy M, Goldstein MK, Meystre SM, Garvin JH, Kim Y, Gobbel GT, Matheny ME, Redd A, Bray BE, Heidenreich P, Bolton D, Heavirland J, Kelly N, Reeves R, Kalsy M, Goldstein MK, Meystre SM. Automating Quality Measures for Heart Failure Using Natural Language Processing: A Descriptive Study in the Department of Veterans Affairs. JMIR Med Inform. 2018 Jan 15; 6(1):e5. PMID: 29335238; PMCID: PMC5789165.
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    9. Meystre S, Gouripeddi R, Tieder J, Simmons J, Srivastava R, Shah S, Meystre S, Gouripeddi R, Tieder J, Simmons J, Srivastava R, Shah S. Enhancing Comparative Effectiveness Research With Automated Pediatric Pneumonia Detection in a Multi-Institutional Clinical Repository: A PHIS+ Pilot Study. J Med Internet Res. 2017 05 15; 19(5):e162. PMID: 28506958; PMCID: PMC5447826.
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    10. Meystre SM, Kim Y, Gobbel GT, Matheny ME, Redd A, Bray BE, Garvin JH, Meystre SM, Kim Y, Gobbel GT, Matheny ME, Redd A, Bray BE, Garvin JH. Congestive heart failure information extraction framework for automated treatment performance measures assessment. J Am Med Inform Assoc. 2017 Apr 01; 24(e1):e40-e46. PMID: 27413122; PMCID: PMC7651945.
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    11. Khalifa A, Meystre S, Khalifa A, Meystre S. Adapting existing natural language processing resources for cardiovascular risk factors identification in clinical notes. J Biomed Inform. 2015 Dec; 58 Suppl:S128-S132. PMID: 26318122; PMCID: PMC4983192.
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    12. Doing-Harris K, Livnat Y, Meystre S, Doing-Harris K, Livnat Y, Meystre S. Automated concept and relationship extraction for the semi-automated ontology management (SEAM) system. J Biomed Semantics. 2015; 6:15. PMID: 25874077; PMCID: PMC4396714.
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    13. Kim Y, Garvin J, Goldstein MK, Meystre SM, Kim Y, Garvin J, Goldstein MK, Meystre SM. Classification of Contextual Use of Left Ventricular Ejection Fraction Assessments. Stud Health Technol Inform. 2015; 216:599-603. PMID: 26262121; PMCID: PMC5055832.
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    14. Meystre SM, Kim Y, Heavirland J, Williams J, Bray BE, Garvin J, Meystre SM, Kim Y, Heavirland J, Williams J, Bray BE, Garvin J. Heart Failure Medications Detection and Prescription Status Classification in Clinical Narrative Documents. Stud Health Technol Inform. 2015; 216:609-13. PMID: 26262123; PMCID: PMC5009609.
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    15. Redd A, Pickard S, Meystre S, Scehnet J, Bolton D, Heavirland J, Weaver AL, Hope C, Garvin JH, Redd A, Pickard S, Meystre S, Scehnet J, Bolton D, Heavirland J, Weaver AL, Hope C, Garvin JH. Evaluation of PHI Hunter in Natural Language Processing Research. Perspect Health Inf Manag. 2015; 12:1f. PMID: 26807078; PMCID: PMC4700871.
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    16. South BR, Mowery D, Suo Y, Leng J, Ferrández Ó, Meystre SM, Chapman WW, South BR, Mowery D, Suo Y, Leng J, Ferr?ndez ?, Meystre SM, Chapman WW. Evaluating the effects of machine pre-annotation and an interactive annotation interface on manual de-identification of clinical text. J Biomed Inform. 2014 Aug; 50:162-72. PMID: 24859155; PMCID: PMC5627768.
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    17. Meystre SM, Ferrández Ó, Friedlin FJ, South BR, Shen S, Samore MH, Meystre SM, Ferr?ndez ?, Friedlin FJ, South BR, Shen S, Samore MH. Text de-identification for privacy protection: a study of its impact on clinical text information content. J Biomed Inform. 2014 Aug; 50:142-50. PMID: 24502938.
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    18. Meystre S, Shen S, Hofmann D, Gundlapalli A, Meystre S, Shen S, Hofmann D, Gundlapalli A. Can physicians recognize their own patients in de-identified notes? Stud Health Technol Inform. 2014; 205:778-82. PMID: 25160293.
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    19. Meystre SM, Ferrández O, South BR, Shen S, Samore MH, Meystre SM, Ferr?ndez O, South BR, Shen S, Samore MH. How much does automatic text de-identification impact clinical problems, tests, and treatments? AMIA Jt Summits Transl Sci Proc. 2013; 2013:177. PMID: 24303260.
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    20. Kim Y, Garvin J, Heavirland J, Meystre SM, Kim Y, Garvin J, Heavirland J, Meystre SM. Improving heart failure information extraction by domain adaptation. Stud Health Technol Inform. 2013; 192:185-9. PMID: 23920541.
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    21. Doing-Harris K, Meystre SM, Samore M, Ceusters W, Doing-Harris K, Meystre SM, Samore M, Ceusters W. Applying ontological realism to medically unexplained syndromes. Stud Health Technol Inform. 2013; 192:97-101. PMID: 23920523.
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    22. Ferrández Ó, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM, Ferr?ndez ?, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM. Generalizability and comparison of automatic clinical text de-identification methods and resources. AMIA Annu Symp Proc. 2012; 2012:199-208. PMID: 23304289; PMCID: PMC3540471.
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    23. Ferrández O, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM, Ferr?ndez O, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM. BoB, a best-of-breed automated text de-identification system for VHA clinical documents. J Am Med Inform Assoc. 2013 Jan 01; 20(1):77-83. PMID: 22947391; PMCID: PMC3555325.
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    24. Ferrández O, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM, Ferr?ndez O, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM. Evaluating current automatic de-identification methods with Veteran's health administration clinical documents. BMC Med Res Methodol. 2012 Jul 27; 12:109. PMID: 22839356; PMCID: PMC3445850.
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    25. Meystre SM, Lee S, Jung CY, Chevrier RD, Meystre SM, Lee S, Jung CY, Chevrier RD. Common data model for natural language processing based on two existing standard information models: CDA+GrAF. J Biomed Inform. 2012 Aug; 45(4):703-10. PMID: 22197801.
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    26. Kim Y, Hurdle J, Meystre SM, Kim Y, Hurdle J, Meystre SM. Using UMLS lexical resources to disambiguate abbreviations in clinical text. AMIA Annu Symp Proc. 2011; 2011:715-22. PMID: 22195128; PMCID: PMC3243121.
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    27. Meystre SM, Thibault J, Shen S, Hurdle JF, South BR, Meystre SM, Thibault J, Shen S, Hurdle JF, South BR. Textractor: a hybrid system for medications and reason for their prescription extraction from clinical text documents. J Am Med Inform Assoc. 2010 Sep-Oct; 17(5):559-62. PMID: 20819864; PMCID: PMC2995680.
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    28. Meystre SM, Friedlin FJ, South BR, Shen S, Samore MH, Meystre SM, Friedlin FJ, South BR, Shen S, Samore MH. Automatic de-identification of textual documents in the electronic health record: a review of recent research. BMC Med Res Methodol. 2010 Aug 02; 10:70. PMID: 20678228; PMCID: PMC2923159.
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    29. Meystre SM, Thibault J, Shen S, Hurdle JF, South BR, Meystre SM, Thibault J, Shen S, Hurdle JF, South BR. Automatically detecting medications and the reason for their prescription in clinical narrative text documents. Stud Health Technol Inform. 2010; 160(Pt 2):944-8. PMID: 20841823; PMCID: PMC3238676.
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    30. Mayer J, Shen S, South BR, Meystre S, Friedlin FJ, Ray WR, Samore M, Mayer J, Shen S, South BR, Meystre S, Friedlin FJ, Ray WR, Samore M. Inductive creation of an annotation schema and a reference standard for de-identification of VA electronic clinical notes. AMIA Annu Symp Proc. 2009 Nov 14; 2009:416-20. PMID: 20351891; PMCID: PMC2815367.
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    31. Meystre SM, Deshmukh VG, Mitchell J, Meystre SM, Deshmukh VG, Mitchell J. A clinical use case to evaluate the i2b2 Hive: predicting asthma exacerbations. AMIA Annu Symp Proc. 2009 Nov 14; 2009:442-6. PMID: 20351896; PMCID: PMC2815458.
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    32. Deshmukh VG, Meystre SM, Mitchell JA, Deshmukh VG, Meystre SM, Mitchell JA. Evaluating the informatics for integrating biology and the bedside system for clinical research. BMC Med Res Methodol. 2009 Oct 28; 9:70. PMID: 19863809; PMCID: PMC2779809.
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    33. Rocha RA, Hurdle JF, Matney S, Matney SA, Narus SP, Meystre S, LaSalle B, Lasalle B, Deshmukh V, Hunter C, Mineau GP, Facelli JC, Mitchell JA, Joyce M, Rocha RA, Hurdle JF, Matney S, Matney SA, Narus SP, Meystre S, LaSalle B, Lasalle B, Deshmukh V, Hunter C, Mineau GP, Facelli JC, Mitchell JA, Joyce M. Utah's statewide informatics platform for translational and clinical science. AMIA Annu Symp Proc. 2008 Nov 06; 1114. PMID: 18999122.
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    34. Meystre SM, Haug PJ, Meystre SM, Haug PJ. Randomized controlled trial of an automated problem list with improved sensitivity. Int J Med Inform. 2008 Sep; 77(9):602-12. PMID: 18280787.
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    35. Meystre SM, Savova GK, Kipper-Schuler KC, Hurdle JF, Meystre SM, Savova GK, Kipper-Schuler KC, Hurdle JF. Extracting information from textual documents in the electronic health record: a review of recent research. Yearb Med Inform. 2008; 128-44. PMID: 18660887.
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    36. Orr RK, Hoehn JL, Col NF, Meystre S. Electronic patient records: some answers to the data representation and reuse challenges. Findings from the section on Patient Records. Yearb Med Inform. 2007; 47-9. PMID: 17700903.
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    37. Meystre S, Haug P, Meystre S, Haug P. Improving the sensitivity of the problem list in an intensive care unit by using natural language processing. AMIA Annu Symp Proc. 2006; 554-8. PMID: 17238402; PMCID: PMC1839473.
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    38. Meystre S, Haug PJ, Meystre S, Haug PJ. Natural language processing to extract medical problems from electronic clinical documents: performance evaluation. J Biomed Inform. 2006 Dec; 39(6):589-99. PMID: 16359928.
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    39. Meystre S, Haug PJ, Meystre S, Haug PJ. Automation of a problem list using natural language processing. BMC Med Inform Decis Mak. 2005 Aug 31; 5:30. PMID: 16135244; PMCID: PMC1208893.
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    40. Meystre S, Meystre S. The current state of telemonitoring: a comment on the literature. Telemed J E Health. 2005 Feb; 11(1):63-9. PMID: 15785222.
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    41. Meystre SM, Haug PJ, Meystre SM, Haug PJ. Comparing natural language processing tools to extract medical problems from narrative text. AMIA Annu Symp Proc. 2005; 525-9. PMID: 16779095; PMCID: PMC1560561.
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    42. Meystre S, Haug PJ, Meystre S, Haug PJ. Evaluation of Medical Problem Extraction from Electronic Clinical Documents Using MetaMap Transfer (MMTx). Stud Health Technol Inform. 2005; 116:823-8. PMID: 16160360.
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    43. Meystre S, Haug PJ, Meystre S, Haug PJ. Medical problem and document model for natural language understanding. AMIA Annu Symp Proc. 2003; 455-9. PMID: 14728214; PMCID: PMC1479970.
      Citations: 3     Fields:    Translation:Humans
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