Hugo Sanabria

TitleAssistant Professor
InstitutionClemson University
DepartmentDepartment of Physics & Astronomy
Address118 Kinard Laboratory
Clemson, South Carolina 29634
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Opanasyuk O, Barth A, Peulen TO, Felekyan S, Kalinin S, Sanabria H, Seidel CAM. Unraveling multi-state molecular dynamics in single-molecule FRET experiments. II. Quantitative analysis of multi-state kinetic networks. J Chem Phys. 2022 Jul 21; 157(3):031501. PMID: 35868918.
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    2. Barth A, Opanasyuk O, Peulen TO, Felekyan S, Kalinin S, Sanabria H, Seidel CAM. Unraveling multi-state molecular dynamics in single-molecule FRET experiments. I. Theory of FRET-lines. J Chem Phys. 2022 Apr 14; 156(14):141501. PMID: 35428384.
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    3. Salmeri E, Elbert A, Lavalle-Cobo A, Aranguren F, Sanabria H, Giorgi M, Forte E. [Relación entre enfermedad cardiovascular y renal en una muestra de pacientes con diabetes del mundo real]. Arch Cardiol Mex. 2022 04 04; 92(2):165-173. PMID: 34260578.
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    4. Saikia N, Yanez-Orozco IS, Qiu R, Hao P, Milikisiyants S, Ou E, Hamilton GL, Weninger KR, Smirnova TI, Sanabria H, Ding F. Integrative structural dynamics probing of the conformational heterogeneity in synaptosomal-associated protein 25. Cell Rep Phys Sci. 2021 Nov 17; 2(11). PMID: 34888535.
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    5. Ma J, Saikia N, Godar S, Hamilton GL, Ding F, Alper J, Sanabria H. Ensemble Switching Unveils a Kinetic Rheostat Mechanism of the Eukaryotic Thiamine Pyrophosphate Riboswitch. RNA. 2021 Apr 16. PMID: 33863818.
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    6. Forte EH, Gómez-Martín C, Harwicz P, Lavalle-Cobo A, Millán D, Salmeri E, Buso C, Sanabria H. [Efectos del aislamiento social, preventivo y obligatorio en pacientes con diabetes tipo 2]. Arch Cardiol Mex. 2020 12 01. PMID: 33262540.
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    7. Medina E, R Latham D, Sanabria H. Unraveling protein's structural dynamics: from configurational dynamics to ensemble switching guides functional mesoscale assemblies. Curr Opin Struct Biol. 2021 02; 66:129-138. PMID: 33246199.
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    8. Dimura M, Peulen TO, Sanabria H, Rodnin D, Hemmen K, Hanke CA, Seidel CAM, Gohlke H. Automated and optimally FRET-assisted structural modeling. Nat Commun. 2020 10 26; 11(1):5394. PMID: 33106483.
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    9. Durham RJ, Latham DR, Sanabria H, Jayaraman V. Structural Dynamics of Glutamate Signaling Systems by smFRET. Biophys J. 2020 11 17; 119(10):1929-1936. PMID: 33096078.
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    10. Medina E, Villalobos P, Hamilton GL, Komives EA, Sanabria H, Ramírez-Sarmiento CA, Babul J. Intrinsically Disordered Regions of the DNA-Binding Domain of Human FoxP1 Facilitate Domain Swapping. J Mol Biol. 2020 09 04; 432(19):5411-5429. PMID: 32735805.
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    11. Yi J, Ge X, Liu E, Cai T, Zhao C, Wen S, Sanabria H, Chen O, Rao AM, Gao J. The correlation between phase transition and photoluminescence properties of CsPbX3 (X= Cl, Br, I) perovskite nanocrystals. Nanoscale Adv. 2020 Oct 01; 2(10):4390-4394. PMID: 34291189.
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    12. Sanabria H, Rodnin D, Hemmen K, Peulen TO, Felekyan S, Fleissner MR, Dimura M, Koberling F, Kühnemuth R, Hubbell W, Gohlke H, Seidel CAM. Resolving dynamics and function of transient states in single enzyme molecules. Nat Commun. 2020 03 06; 11(1):1231. PMID: 32144241.
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    13. Tsytlonok M, Hemmen K, Hamilton G, Kolimi N, Felekyan S, Seidel CAM, Tompa P, Sanabria H. Specific Conformational Dynamics and Expansion Underpin a Multi-Step Mechanism for Specific Binding of p27 with Cdk2/Cyclin A. J Mol Biol. 2020 04 17; 432(9):2998-3017. PMID: 32088186.
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    14. Hamilton GL, Alper J, Sanabria H. Reporting on the future of integrative structural biology ORAU workshop. Front Biosci (Landmark Ed). 2020 01 01; 25(1):43-68. PMID: 31585877.
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    15. Liu E, Zhu H, Yi J, Kobbekaduwa K, Adhikari P, Liu J, Shi Y, Zhang J, Li H, Oprisan A, Rao AM, Sanabria H, Chen O, Gao J. Manipulating Charge Transfer from Core to Shell in CdSe/CdS/Au Heterojunction Quantum Dots. ACS Appl Mater Interfaces. 2019 Dec 26; 11(51):48551-48555. PMID: 31782302.
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    16. Tsytlonok M, Sanabria H, Wang Y, Felekyan S, Hemmen K, Phillips AH, Yun MK, Waddell MB, Park CG, Vaithiyalingam S, Iconaru L, White SW, Tompa P, Seidel CAM, Kriwacki R. Dynamic anticipation by Cdk2/Cyclin A-bound p27 mediates signal integration in cell cycle regulation. Nat Commun. 2019 04 11; 10(1):1676. PMID: 30976006.
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    17. Choi UB, Sanabria H, Smirnova T, Bowen ME, Weninger KR. Spontaneous Switching among Conformational Ensembles in Intrinsically Disordered Proteins. Biomolecules. 2019 03 22; 9(3). PMID: 30909517.
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    18. Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Adariani SR, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, Gebhardt C, Götz M, Gouridis G, Gratton E, Ha T, Hao P, Hanke CA, Hartmann A, Hendrix J, Hildebrandt LL, Hirschfeld V, Hohlbein J, Hua B, Hübner CG, Kallis E, Kapanidis AN, Kim JY, Krainer G, Lamb DC, Lee NK, Lemke EA, Levesque B, Levitus M, McCann JJ, Naredi-Rainer N, Nettels D, Ngo T, Qiu R, Robb NC, Röcker C, Sanabria H, Schlierf M, Schröder T, Schuler B, Seidel H, Streit L, Thurn J, Tinnefeld P, Tyagi S, Vandenberk N, Vera AM, Weninger KR, Wünsch B, Yanez-Orozco IS, Michaelis J, Seidel CAM, Craggs TD, Hugel T. Publisher Correction: Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study. Nat Methods. 2018 Nov; 15(11):984. PMID: 30327572.
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    19. Yanez Orozco IS, Mindlin FA, Ma J, Wang B, Levesque B, Spencer M, Rezaei Adariani S, Hamilton G, Ding F, Bowen ME, Sanabria H. Identifying weak interdomain interactions that stabilize the supertertiary structure of the N-terminal tandem PDZ domains of PSD-95. Nat Commun. 2018 09 13; 9(1):3724. PMID: 30214057.
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    20. Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Rezaei Adariani S, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, Gebhardt C, Götz M, Gouridis G, Gratton E, Ha T, Hao P, Hanke CA, Hartmann A, Hendrix J, Hildebrandt LL, Hirschfeld V, Hohlbein J, Hua B, Hübner CG, Kallis E, Kapanidis AN, Kim JY, Krainer G, Lamb DC, Lee NK, Lemke EA, Levesque B, Levitus M, McCann JJ, Naredi-Rainer N, Nettels D, Ngo T, Qiu R, Robb NC, Röcker C, Sanabria H, Schlierf M, Schröder T, Schuler B, Seidel H, Streit L, Thurn J, Tinnefeld P, Tyagi S, Vandenberk N, Vera AM, Weninger KR, Wünsch B, Yanez-Orozco IS, Michaelis J, Seidel CAM, Craggs TD, Hugel T. Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study. Nat Methods. 2018 09; 15(9):669-676. PMID: 30171252.
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    21. Dieuzeide G, Puchulu F, Sanabria H, Sinay I. [Cardiovascular effects of new non-insulinic anti-diabetes drugs]. Medicina (B Aires). 2018; 78(3):185-193. PMID: 29940545.
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    22. Ma J, Yanez-Orozco IS, Rezaei Adariani S, Dolino D, Jayaraman V, Sanabria H. High Precision FRET at Single-molecule Level for Biomolecule Structure Determination. J Vis Exp. 2017 05 13; (123). PMID: 28570518.
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    23. Hoffman L, Li L, Alexov E, Sanabria H, Waxham MN. Cytoskeletal-like Filaments of Ca2+-Calmodulin-Dependent Protein Kinase II Are Formed in a Regulated and Zn2+-Dependent Manner. Biochemistry. 2017 04 18; 56(15):2149-2160. PMID: 28318265.
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    24. Dolino DM, Rezaei Adariani S, Shaikh SA, Jayaraman V, Sanabria H. Conformational Selection and Submillisecond Dynamics of the Ligand-binding Domain of the N-Methyl-d-aspartate Receptor. J Biol Chem. 2016 07 29; 291(31):16175-85. PMID: 27226581.
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    25. Sanchez RA, Sanabria H, de Los Santos C, Ramirez AJ. Incretins and selective renal sodium-glucose co-transporter 2 inhibitors in hypertension and coronary heart disease. World J Diabetes. 2015 Sep 10; 6(11):1186-97. PMID: 26380062.
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    26. Hoffman L, Wang X, Sanabria H, Cheung MS, Putkey JA, Waxham MN. Relative Cosolute Size Influences the Kinetics of Protein-Protein Interactions. Biophys J. 2015 Aug 04; 109(3):510-20. PMID: 26244733.
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    27. Santos JM, Favaloro RR, Lowenstein D, Sanabria H, Raffaelli H, Hershson A. Medium-term glycemic control in diabetics before coronary bypass surgery. Medicina (B Aires). 2015; 75(5):277-81. PMID: 26502461.
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    28. Felekyan S, Sanabria H, Kalinin S, Kühnemuth R, Seidel CA. Analyzing Förster resonance energy transfer with fluctuation algorithms. Methods Enzymol. 2013; 519:39-85. PMID: 23280107.
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    29. Felekyan S, Kalinin S, Sanabria H, Valeri A, Seidel CA. Filtered FCS: species auto- and cross-correlation functions highlight binding and dynamics in biomolecules. Chemphyschem. 2012 Mar; 13(4):1036-53. PMID: 22407544.
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    30. Kim SA, Sanabria H, Digman MA, Gratton E, Schwille P, Zipfel WR, Waxham MN. Quantifying translational mobility in neurons: comparison between current optical techniques. J Neurosci. 2010 Dec 08; 30(49):16409-16. PMID: 21147979.
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    31. Sanabria H, Waxham MN. Transient anomalous subdiffusion: effects of specific and nonspecific probe binding with actin gels. J Phys Chem B. 2010 Jan 21; 114(2):959-72. PMID: 20038146.
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    32. Homouz D, Sanabria H, Waxham MN, Cheung MS. Modulation of calmodulin plasticity by the effect of macromolecular crowding. J Mol Biol. 2009 Sep 04; 391(5):933-43. PMID: 19577574.
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    33. Sanabria H, Swulius MT, Kolodziej SJ, Liu J, Waxham MN. {beta}CaMKII regulates actin assembly and structure. J Biol Chem. 2009 Apr 10; 284(15):9770-80. PMID: 19208632.
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    34. Sanabria H, Digman MA, Gratton E, Waxham MN. Spatial diffusivity and availability of intracellular calmodulin. Biophys J. 2008 Dec 15; 95(12):6002-15. PMID: 18820232.
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    35. Goins AB, Sanabria H, Waxham MN. Macromolecular crowding and size effects on probe microviscosity. Biophys J. 2008 Dec; 95(11):5362-73. PMID: 18790853.
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    36. Vajrala V, Claycomb JR, Sanabria H, Miller JH. Effects of oscillatory electric fields on internal membranes: an analytical model. Biophys J. 2008 Mar 15; 94(6):2043-52. PMID: 18065483.
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    37. Sanabria H, Miller JH. Relaxation processes due to the electrode-electrolyte interface in ionic solutions. Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Nov; 74(5 Pt 1):051505. PMID: 17279915.
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    38. Sanabria H, Miller JH, Mershin A, Luduena RF, Kolomenski AA, Schuessler HA, Nanopoulos DV. Impedance spectroscopy of alpha-beta tubulin heterodimer suspensions. Biophys J. 2006 Jun 15; 90(12):4644-50. PMID: 16732057.
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    39. Orr RK, Hoehn JL, Col NF. The learning curve for sentinel node biopsy in breast cancer: practical considerations. Arch Surg. 1999 Jul; 134(7):764-7. PMID: 17040979.
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    40. Orr RK, Hoehn JL, Col NF. The learning curve for sentinel node biopsy in breast cancer: practical considerations. Arch Surg. 1999 Jul; 134(7):764-7. PMID: 34506140.
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