Tugba Gul Kucukkal

TitlePost Doctoral Fellow
InstitutionClemson University
DepartmentDepartment of Physics & Astronomy
Address118 Kinard Laboratory
Clemson, South Carolina 29634
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Yang Y, Kucukkal TG, Li J, Alexov E, Cao W, Yang Y, Kucukkal TG, Li J, Alexov E, Cao W. Binding Analysis of Methyl-CpG Binding Domain of MeCP2 and Rett Syndrome Mutations. ACS Chem Biol. 2016 10 21; 11(10):2706-2715. PMID: 27356039.
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    2. Peng Y, Suryadi J, Yang Y, Kucukkal TG, Cao W, Alexov E, Peng Y, Suryadi J, Yang Y, Kucukkal TG, Cao W, Alexov E. Mutations in the KDM5C ARID Domain and Their Plausible Association with Syndromic Claes-Jensen-Type Disease. Int J Mol Sci. 2015 Nov 13; 16(11):27270-87. PMID: 26580603; PMCID: PMC4661880.
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    3. Kucukkal TG, Yang Y, Uvarov O, Cao W, Alexov E, Kucukkal TG, Yang Y, Uvarov O, Cao W, Alexov E. Impact of Rett Syndrome Mutations on MeCP2 MBD Stability. Biochemistry. 2015 Oct 20; 54(41):6357-68. PMID: 26418480.
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    4. Petukh M, Kucukkal TG, Alexov E, Petukh M, Kucukkal TG, Alexov E. On human disease-causing amino acid variants: statistical study of sequence and structural patterns. Hum Mutat. 2015 May; 36(5):524-534. PMID: 25689729; PMCID: PMC4409542.
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    5. Kucukkal TG, Alexov E, Kucukkal TG, Alexov E. Structural, Dynamical, and Energetical Consequences of Rett Syndrome Mutation R133C in MeCP2. Comput Math Methods Med. 2015; 2015:746157. PMID: 26064184; PMCID: PMC4431600.
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    6. Kucukkal TG, Petukh M, Li L, Alexov E, Kucukkal TG, Petukh M, Li L, Alexov E. Structural and physico-chemical effects of disease and non-disease nsSNPs on proteins. Curr Opin Struct Biol. 2015 Jun; 32:18-24. PMID: 25658850; PMCID: PMC4511717.
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    7. Kucukkal TG, Yang Y, Chapman SC, Cao W, Alexov E, Kucukkal TG, Yang Y, Chapman SC, Cao W, Alexov E. Computational and experimental approaches to reveal the effects of single nucleotide polymorphisms with respect to disease diagnostics. Int J Mol Sci. 2014 May 30; 15(6):9670-717. PMID: 24886813; PMCID: PMC4100115.
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    8. Orr RK, Hoehn JL, Col NF, Kucukkal TG, Stuart SJ. Polarizable molecular dynamics simulations of aqueous dipeptides. J Phys Chem B. 2012 Aug 02; 116(30):8733-40. PMID: 22747103.
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    9. Biswas PK, Vellore NA, Yancey JA, Kucukkal TG, Collier G, Brooks BR, Stuart SJ, Latour RA, Biswas PK, Vellore NA, Yancey JA, Kucukkal TG, Collier G, Brooks BR, Stuart SJ, Latour RA. Simulation of multiphase systems utilizing independent force fields to control intraphase and interphase behavior. J Comput Chem. 2012 Jun 15; 33(16):1458-66. PMID: 22488548; PMCID: PMC4110183.
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